Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc4Q8CG47 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smc4Q8CG47 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Smc4Q8CG47 Gm14859-201ENSMUST00000117752 357 ntBASIC20.97■□□□□ 0.95
Smc4Q8CG47 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc4Q8CG47 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc4Q8CG47 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc4Q8CG47 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc4Q8CG47 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.95
Smc4Q8CG47 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Smc4Q8CG47 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smc4Q8CG47 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc4Q8CG47 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Gm29518-201ENSMUST00000190858 372 ntBASIC20.93■□□□□ 0.94
Smc4Q8CG47 Gm37722-201ENSMUST00000193757 208 ntBASIC20.93■□□□□ 0.94
Smc4Q8CG47 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.93■□□□□ 0.94
Smc4Q8CG47 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.93■□□□□ 0.94
Smc4Q8CG47 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.93■□□□□ 0.94
Smc4Q8CG47 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc4Q8CG47 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.92■□□□□ 0.94
Smc4Q8CG47 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.92■□□□□ 0.94
Smc4Q8CG47 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.92■□□□□ 0.94
Smc4Q8CG47 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.92■□□□□ 0.94
Smc4Q8CG47 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc4Q8CG47 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc4Q8CG47 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms