Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fam228aQ8CDW1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Fam228aQ8CDW1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Fam228aQ8CDW1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fam228aQ8CDW1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Gm10849-201ENSMUST00000100397 618 ntBASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Gm13148-201ENSMUST00000118892 745 ntBASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Gm26571-201ENSMUST00000181399 666 ntBASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Fam228aQ8CDW1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Gm6576-201ENSMUST00000169678 883 ntBASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Gm10138-203ENSMUST00000206952 366 ntBASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.87■□□□□ 0.45
Fam228aQ8CDW1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.86■□□□□ 0.45
Fam228aQ8CDW1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Fam228aQ8CDW1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fam228aQ8CDW1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms