Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim52Q8CDV4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim52Q8CDV4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim52Q8CDV4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim52Q8CDV4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim52Q8CDV4 Birc2-201ENSMUST00000054878 378 ntBASIC21■□□□□ 0.95
Trim52Q8CDV4 Gm7461-201ENSMUST00000058918 827 ntBASIC21■□□□□ 0.95
Trim52Q8CDV4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Trim52Q8CDV4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim52Q8CDV4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim52Q8CDV4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim52Q8CDV4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim52Q8CDV4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Gm12895-201ENSMUST00000122214 226 ntBASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim52Q8CDV4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.98■□□□□ 0.95
Trim52Q8CDV4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.98■□□□□ 0.95
Trim52Q8CDV4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim52Q8CDV4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim52Q8CDV4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim52Q8CDV4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trim52Q8CDV4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim52Q8CDV4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms