Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ccdc38Q8CDN8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc38Q8CDN8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc38Q8CDN8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc38Q8CDN8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc38Q8CDN8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc38Q8CDN8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc38Q8CDN8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.83■□□□□ 0.6
Ccdc38Q8CDN8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc38Q8CDN8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc38Q8CDN8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc38Q8CDN8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc38Q8CDN8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc38Q8CDN8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc38Q8CDN8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc38Q8CDN8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc38Q8CDN8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc38Q8CDN8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc38Q8CDN8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms