Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Gm37179-201ENSMUST00000194862 823 ntBASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nhlrc3Q8CCH2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.33□□□□□ -0.11
Nhlrc3Q8CCH2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhlrc3Q8CCH2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhlrc3Q8CCH2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nhlrc3Q8CCH2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Nhlrc3Q8CCH2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc3Q8CCH2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc3Q8CCH2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc3Q8CCH2 Gm11249-201ENSMUST00000117071 859 ntBASIC14.33□□□□□ -0.12
Nhlrc3Q8CCH2 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.33□□□□□ -0.12
Nhlrc3Q8CCH2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.33□□□□□ -0.12
Nhlrc3Q8CCH2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc3Q8CCH2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc3Q8CCH2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc3Q8CCH2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nhlrc3Q8CCH2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Gm12896-201ENSMUST00000118430 226 ntBASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nhlrc3Q8CCH2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nhlrc3Q8CCH2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nhlrc3Q8CCH2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms