Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prpf31Q8CCF0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Gm26039-201ENSMUST00000158152 144 ntBASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf31Q8CCF0 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Gm27000-201ENSMUST00000182943 842 ntBASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf31Q8CCF0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf31Q8CCF0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf31Q8CCF0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf31Q8CCF0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.58■□□□□ 0.57
Prpf31Q8CCF0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.58■□□□□ 0.57
Prpf31Q8CCF0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf31Q8CCF0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf31Q8CCF0 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf31Q8CCF0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Gm25016-201ENSMUST00000158399 131 ntBASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms