Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Gm13559-201ENSMUST00000120476 863 ntBASIC16.45■□□□□ 0.22
SynpoQ8CC35 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SynpoQ8CC35 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SynpoQ8CC35 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.44■□□□□ 0.22
SynpoQ8CC35 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.44■□□□□ 0.22
SynpoQ8CC35 Gm11539-201ENSMUST00000119837 557 ntBASIC16.44■□□□□ 0.22
SynpoQ8CC35 Gm13436-201ENSMUST00000120418 567 ntBASIC16.44■□□□□ 0.22
SynpoQ8CC35 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.44■□□□□ 0.22
SynpoQ8CC35 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SynpoQ8CC35 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.43■□□□□ 0.22
SynpoQ8CC35 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SynpoQ8CC35 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Gm10517-202ENSMUST00000192970 758 ntBASIC16.42■□□□□ 0.22
SynpoQ8CC35 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.42■□□□□ 0.22
SynpoQ8CC35 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SynpoQ8CC35 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.41■□□□□ 0.22
SynpoQ8CC35 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.41■□□□□ 0.22
SynpoQ8CC35 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SynpoQ8CC35 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms