Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.31■□□□□ 0.36
Rfx6Q8C7R7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rfx6Q8C7R7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx6Q8C7R7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx6Q8C7R7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.27■□□□□ 0.36
Rfx6Q8C7R7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfx6Q8C7R7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Rfx6Q8C7R7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfx6Q8C7R7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfx6Q8C7R7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx6Q8C7R7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms