Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm29791-202ENSMUST00000207888 369 ntBASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 Gm11779-201ENSMUST00000118541 368 ntBASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap54Q8C6S9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cfap54Q8C6S9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Gm27867-201ENSMUST00000184778 125 ntBASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Gm6376-201ENSMUST00000209407 580 ntBASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cfap54Q8C6S9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Gm15467-201ENSMUST00000120582 445 ntBASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfap54Q8C6S9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cfap54Q8C6S9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cfap54Q8C6S9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cfap54Q8C6S9 Gm14822-201ENSMUST00000122247 291 ntBASIC16.27■□□□□ 0.19
Cfap54Q8C6S9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cfap54Q8C6S9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cfap54Q8C6S9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cfap54Q8C6S9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cfap54Q8C6S9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Rprl3-201ENSMUST00000157400 290 ntBASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Gm10175-201ENSMUST00000086013 645 ntBASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cfap54Q8C6S9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cfap54Q8C6S9 Grk6-207ENSMUST00000225925 2769 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms