Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptcd1Q8C2E4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ptcd1Q8C2E4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ptcd1Q8C2E4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ptcd1Q8C2E4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ptcd1Q8C2E4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ptcd1Q8C2E4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Ptcd1Q8C2E4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ptcd1Q8C2E4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Gm18195-201ENSMUST00000207604 706 ntBASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptcd1Q8C2E4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Gm10052-201ENSMUST00000168019 960 ntBASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Mir8112-201ENSMUST00000184382 131 ntBASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Gm37935-201ENSMUST00000192012 982 ntBASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Gm7729-201ENSMUST00000050143 801 ntBASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptcd1Q8C2E4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Gm18206-201ENSMUST00000207027 926 ntBASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptcd1Q8C2E4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptcd1Q8C2E4 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.85■□□□□ 0.93
Ptcd1Q8C2E4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptcd1Q8C2E4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Ptcd1Q8C2E4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptcd1Q8C2E4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ptcd1Q8C2E4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.85■□□□□ 0.93
Ptcd1Q8C2E4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Gm27525-201ENSMUST00000184465 107 ntBASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ptcd1Q8C2E4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptcd1Q8C2E4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptcd1Q8C2E4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptcd1Q8C2E4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptcd1Q8C2E4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptcd1Q8C2E4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptcd1Q8C2E4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.83■□□□□ 0.93
Ptcd1Q8C2E4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms