Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Gm26039-201ENSMUST00000158152 144 ntBASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim47Q8C0E3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim47Q8C0E3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.83■□□□□ 0.61
Trim47Q8C0E3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim47Q8C0E3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim47Q8C0E3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim47Q8C0E3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trim47Q8C0E3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim47Q8C0E3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim47Q8C0E3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim47Q8C0E3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim47Q8C0E3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim47Q8C0E3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim47Q8C0E3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 AA414768-201ENSMUST00000121924 1257 ntBASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim47Q8C0E3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim47Q8C0E3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim47Q8C0E3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim47Q8C0E3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim47Q8C0E3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim47Q8C0E3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim47Q8C0E3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim47Q8C0E3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim47Q8C0E3 Gm6345-202ENSMUST00000180900 204 ntBASIC18.79■□□□□ 0.6
Trim47Q8C0E3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim47Q8C0E3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms