Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.24■□□□□ 0.35
Sh3rf2Q8BZT2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3rf2Q8BZT2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Sh3rf2Q8BZT2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Gm17807-201ENSMUST00000186869 298 ntBASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3rf2Q8BZT2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh3rf2Q8BZT2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Sh3rf2Q8BZT2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.21■□□□□ 0.34
Sh3rf2Q8BZT2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Gm27741-201ENSMUST00000185060 237 ntBASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3rf2Q8BZT2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.19■□□□□ 0.34
Sh3rf2Q8BZT2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms