Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm10566-201ENSMUST00000086739 996 ntBASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdk5rap1Q8BTW8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm27000-201ENSMUST00000182943 842 ntBASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.13■□□□□ 0.17
Cdk5rap1Q8BTW8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.12■□□□□ 0.17
Cdk5rap1Q8BTW8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm14859-201ENSMUST00000117752 357 ntBASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cdk5rap1Q8BTW8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms