Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Gm10013-201ENSMUST00000106074 672 ntBASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Gm10566-201ENSMUST00000086739 996 ntBASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup54Q8BTS4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Gm7977-201ENSMUST00000193787 748 ntBASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Nup54Q8BTS4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nup54Q8BTS4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.39■□□□□ 0.38
Nup54Q8BTS4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Gm27389-201ENSMUST00000183622 195 ntBASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Gm21559-201ENSMUST00000220638 855 ntBASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Gm8587-201ENSMUST00000076538 843 ntBASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup54Q8BTS4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Gm6659-201ENSMUST00000174752 547 ntBASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup54Q8BTS4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup54Q8BTS4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Gm26039-201ENSMUST00000158152 144 ntBASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.36■□□□□ 0.37
Nup54Q8BTS4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup54Q8BTS4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.36■□□□□ 0.37
Nup54Q8BTS4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup54Q8BTS4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms