Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
Col16a1Q8BLX7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col16a1Q8BLX7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col16a1Q8BLX7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col16a1Q8BLX7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC22.3■■□□□ 1.16
Col16a1Q8BLX7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC22.3■■□□□ 1.16
Col16a1Q8BLX7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col16a1Q8BLX7 Gfra2-202ENSMUST00000227633 1480 ntBASIC22.3■■□□□ 1.16
Col16a1Q8BLX7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col16a1Q8BLX7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col16a1Q8BLX7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col16a1Q8BLX7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Gm5364-201ENSMUST00000216789 889 ntBASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col16a1Q8BLX7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col16a1Q8BLX7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Col16a1Q8BLX7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC22.27■■□□□ 1.15
Col16a1Q8BLX7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC22.26■■□□□ 1.15
Col16a1Q8BLX7 Gm8969-201ENSMUST00000199694 526 ntBASIC22.26■■□□□ 1.15
Col16a1Q8BLX7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC22.26■■□□□ 1.15
Col16a1Q8BLX7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col16a1Q8BLX7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Col16a1Q8BLX7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col16a1Q8BLX7 Iqck-206ENSMUST00000208658 2891 ntBASIC22.26■■□□□ 1.15
Col16a1Q8BLX7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col16a1Q8BLX7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.26■■□□□ 1.15
Col16a1Q8BLX7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC22.25■■□□□ 1.15
Col16a1Q8BLX7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms