Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smg1Q8BKX6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smg1Q8BKX6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smg1Q8BKX6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Gm27867-201ENSMUST00000184778 125 ntBASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Gm27397-201ENSMUST00000184997 107 ntBASIC14.36□□□□□ -0.11
Smg1Q8BKX6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smg1Q8BKX6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms