Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Gm18669-201ENSMUST00000216049 778 ntBASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp1Q8BJQ2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Gm10566-201ENSMUST00000086739 996 ntBASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Usp1Q8BJQ2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Usp1Q8BJQ2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Gm28033-201ENSMUST00000184224 96 ntBASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp1Q8BJQ2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Gm6623-201ENSMUST00000173570 544 ntBASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Gm37722-201ENSMUST00000193757 208 ntBASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp1Q8BJQ2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp1Q8BJQ2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp1Q8BJQ2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp1Q8BJQ2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp1Q8BJQ2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp1Q8BJQ2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp1Q8BJQ2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Usp1Q8BJQ2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp1Q8BJQ2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp1Q8BJQ2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp1Q8BJQ2 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.01■□□□□ 0.47
Usp1Q8BJQ2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms