Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh20Q8BIZ0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh20Q8BIZ0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh20Q8BIZ0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh20Q8BIZ0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh20Q8BIZ0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh20Q8BIZ0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh20Q8BIZ0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh20Q8BIZ0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh20Q8BIZ0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh20Q8BIZ0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Gm43183-201ENSMUST00000200632 547 ntBASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Gm42545-201ENSMUST00000202755 922 ntBASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.57■□□□□ 0.24
Pcdh20Q8BIZ0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh20Q8BIZ0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms