Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf38Q8BI21 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf38Q8BI21 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Gm12527-201ENSMUST00000117967 564 ntBASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Gm27275-201ENSMUST00000184318 272 ntBASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf38Q8BI21 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf38Q8BI21 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Gm18025-201ENSMUST00000221733 862 ntBASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf38Q8BI21 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.4■□□□□ 0.22
Rnf38Q8BI21 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms