Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim65Q8BFW4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Gm7791-201ENSMUST00000219066 539 ntBASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim65Q8BFW4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim65Q8BFW4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim65Q8BFW4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Trim65Q8BFW4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Trim65Q8BFW4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim65Q8BFW4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
Trim65Q8BFW4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Gm5417-201ENSMUST00000079706 384 ntBASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim65Q8BFW4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Gm10252-201ENSMUST00000209541 832 ntBASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim65Q8BFW4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms