Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Trim50Q810I2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.58■□□□□ 0.24
Trim50Q810I2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim50Q810I2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trim50Q810I2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trim50Q810I2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.57■□□□□ 0.24
Trim50Q810I2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Trim50Q810I2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim50Q810I2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim50Q810I2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.57■□□□□ 0.24
Trim50Q810I2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.57■□□□□ 0.24
Trim50Q810I2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim50Q810I2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim50Q810I2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trim50Q810I2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim50Q810I2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim50Q810I2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim50Q810I2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim50Q810I2 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.56■□□□□ 0.24
Trim50Q810I2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Trim50Q810I2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim50Q810I2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim50Q810I2 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.56■□□□□ 0.24
Trim50Q810I2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.56■□□□□ 0.24
Trim50Q810I2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim50Q810I2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim50Q810I2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.55■□□□□ 0.24
Trim50Q810I2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim50Q810I2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Trim50Q810I2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim50Q810I2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim50Q810I2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim50Q810I2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim50Q810I2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim50Q810I2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim50Q810I2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim50Q810I2 Gm37055-201ENSMUST00000191866 133 ntBASIC16.55■□□□□ 0.24
Trim50Q810I2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim50Q810I2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim50Q810I2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim50Q810I2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim50Q810I2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim50Q810I2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim50Q810I2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim50Q810I2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms