Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Gm15378-201ENSMUST00000121894 207 ntBASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nucks1Q80XU3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.18■□□□□ 0.5
Nucks1Q80XU3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nucks1Q80XU3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nucks1Q80XU3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nucks1Q80XU3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Gm37025-201ENSMUST00000195159 829 ntBASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nucks1Q80XU3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nucks1Q80XU3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nucks1Q80XU3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.14■□□□□ 0.5
Nucks1Q80XU3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Gm13216-201ENSMUST00000117145 591 ntBASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Gm10698-201ENSMUST00000182663 604 ntBASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nucks1Q80XU3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms