Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Vrk1Q80X41 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.22■□□□□ 0.19
Vrk1Q80X41 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.22■□□□□ 0.19
Vrk1Q80X41 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.22■□□□□ 0.19
Vrk1Q80X41 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Mir770-201ENSMUST00000103252 94 ntBASIC16.21■□□□□ 0.19
Vrk1Q80X41 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk1Q80X41 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Vrk1Q80X41 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vrk1Q80X41 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.2■□□□□ 0.18
Vrk1Q80X41 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.2■□□□□ 0.18
Vrk1Q80X41 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.2■□□□□ 0.18
Vrk1Q80X41 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk1Q80X41 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Mir3081-201ENSMUST00000175305 84 ntBASIC16.19■□□□□ 0.18
Vrk1Q80X41 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.19■□□□□ 0.18
Vrk1Q80X41 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.19■□□□□ 0.18
Vrk1Q80X41 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk1Q80X41 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vrk1Q80X41 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms