Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rpap1Q80TE0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rpap1Q80TE0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rpap1Q80TE0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rpap1Q80TE0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rpap1Q80TE0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC26.34■■□□□ 1.81
Rpap1Q80TE0 Gm43332-201ENSMUST00000202511 1044 ntBASIC26.34■■□□□ 1.81
Rpap1Q80TE0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rpap1Q80TE0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC26.34■■□□□ 1.81
Rpap1Q80TE0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rpap1Q80TE0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Gm13830-205ENSMUST00000201195 1155 ntBASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Gm10060-201ENSMUST00000212002 111 ntBASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rpap1Q80TE0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rpap1Q80TE0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rpap1Q80TE0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC26.32■■□□□ 1.8
Rpap1Q80TE0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC26.32■■□□□ 1.8
Rpap1Q80TE0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rpap1Q80TE0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Rpap1Q80TE0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
Rpap1Q80TE0 Gm32996-201ENSMUST00000199828 1447 ntBASIC26.32■■□□□ 1.8
Rpap1Q80TE0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rpap1Q80TE0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Gm8000-201ENSMUST00000188378 592 ntBASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rpap1Q80TE0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Gm5364-201ENSMUST00000216789 889 ntBASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rpap1Q80TE0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC26.29■■□□□ 1.8
Rpap1Q80TE0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Rpap1Q80TE0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC26.29■■□□□ 1.8
Rpap1Q80TE0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rpap1Q80TE0 Mir5126-201ENSMUST00000175513 77 ntBASIC26.29■■□□□ 1.8
Rpap1Q80TE0 Gm44430-201ENSMUST00000203376 995 ntBASIC26.29■■□□□ 1.8
Rpap1Q80TE0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Rpap1Q80TE0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Rpap1Q80TE0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Rpap1Q80TE0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rpap1Q80TE0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
Rpap1Q80TE0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Gm8969-201ENSMUST00000199694 526 ntBASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Rpap1Q80TE0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC26.27■■□□□ 1.8
Rpap1Q80TE0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rpap1Q80TE0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rpap1Q80TE0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rpap1Q80TE0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms