Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Gm33142-201ENSMUST00000193913 867 ntBASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Gm21559-201ENSMUST00000220638 855 ntBASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Gm8587-201ENSMUST00000076538 843 ntBASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Gm7213-201ENSMUST00000215977 950 ntBASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh8Q7TSK3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Gm14859-201ENSMUST00000117752 357 ntBASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Gm17661-201ENSMUST00000170317 270 ntBASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh8Q7TSK3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh8Q7TSK3 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.77■□□□□ 0.27
Pcdh8Q7TSK3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh8Q7TSK3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh8Q7TSK3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh8Q7TSK3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh8Q7TSK3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.77■□□□□ 0.27
Pcdh8Q7TSK3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdh8Q7TSK3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh8Q7TSK3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Mir1668-201ENSMUST00000184114 107 ntBASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh8Q7TSK3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms