Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Gm6345-202ENSMUST00000180900 204 ntBASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nphp3Q7TNH6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nphp3Q7TNH6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.64■□□□□ 0.9
Nphp3Q7TNH6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nphp3Q7TNH6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nphp3Q7TNH6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nphp3Q7TNH6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nphp3Q7TNH6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 AA414768-201ENSMUST00000121924 1257 ntBASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Gm27389-201ENSMUST00000183622 195 ntBASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nphp3Q7TNH6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nphp3Q7TNH6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Gm26039-201ENSMUST00000158152 144 ntBASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nphp3Q7TNH6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp3Q7TNH6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Nphp3Q7TNH6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp3Q7TNH6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp3Q7TNH6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms