Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox11Q7M6Y2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox11Q7M6Y2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox11Q7M6Y2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Olfr129-201ENSMUST00000122318 993 ntBASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sox11Q7M6Y2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Sox11Q7M6Y2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Gm28659-201ENSMUST00000188013 759 ntBASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox11Q7M6Y2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox11Q7M6Y2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms