Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm29518-201ENSMUST00000190858 372 ntBASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.57■□□□□ 0.24
Ubfd1Q78JW9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Gm37722-201ENSMUST00000193757 208 ntBASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubfd1Q78JW9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ubfd1Q78JW9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Gm17808-201ENSMUST00000200859 894 ntBASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ubfd1Q78JW9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Gm7284-201ENSMUST00000131667 944 ntBASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubfd1Q78JW9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms