Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sned1Q70E20 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
Sned1Q70E20 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sned1Q70E20 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.58■□□□□ 0.88
Sned1Q70E20 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sned1Q70E20 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.58■□□□□ 0.88
Sned1Q70E20 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sned1Q70E20 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sned1Q70E20 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sned1Q70E20 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sned1Q70E20 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sned1Q70E20 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sned1Q70E20 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sned1Q70E20 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sned1Q70E20 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sned1Q70E20 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sned1Q70E20 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.57■□□□□ 0.88
Sned1Q70E20 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sned1Q70E20 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.57■□□□□ 0.88
Sned1Q70E20 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.57■□□□□ 0.88
Sned1Q70E20 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.57■□□□□ 0.88
Sned1Q70E20 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.57■□□□□ 0.88
Sned1Q70E20 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.57■□□□□ 0.88
Sned1Q70E20 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sned1Q70E20 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Sned1Q70E20 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sned1Q70E20 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Sned1Q70E20 Gm6089-201ENSMUST00000197666 938 ntBASIC20.56■□□□□ 0.88
Sned1Q70E20 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sned1Q70E20 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.56■□□□□ 0.88
Sned1Q70E20 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sned1Q70E20 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sned1Q70E20 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sned1Q70E20 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sned1Q70E20 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Sned1Q70E20 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Sned1Q70E20 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sned1Q70E20 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.55■□□□□ 0.88
Sned1Q70E20 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.55■□□□□ 0.88
Sned1Q70E20 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.55■□□□□ 0.88
Sned1Q70E20 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.55■□□□□ 0.88
Sned1Q70E20 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sned1Q70E20 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sned1Q70E20 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sned1Q70E20 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sned1Q70E20 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.55■□□□□ 0.88
Sned1Q70E20 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sned1Q70E20 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sned1Q70E20 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sned1Q70E20 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Sned1Q70E20 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sned1Q70E20 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sned1Q70E20 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.54■□□□□ 0.88
Sned1Q70E20 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sned1Q70E20 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.54■□□□□ 0.88
Sned1Q70E20 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sned1Q70E20 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sned1Q70E20 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sned1Q70E20 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sned1Q70E20 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sned1Q70E20 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sned1Q70E20 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sned1Q70E20 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Sned1Q70E20 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.53■□□□□ 0.88
Sned1Q70E20 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.53■□□□□ 0.88
Sned1Q70E20 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.53■□□□□ 0.88
Sned1Q70E20 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Sned1Q70E20 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Gm26308-201ENSMUST00000157768 69 ntBASIC20.53■□□□□ 0.88
Sned1Q70E20 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.53■□□□□ 0.88
Sned1Q70E20 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sned1Q70E20 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sned1Q70E20 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms