Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm8Q6ZWM4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm8Q6ZWM4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm8Q6ZWM4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm8Q6ZWM4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Gm30025-201ENSMUST00000218555 728 ntBASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm8Q6ZWM4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lsm8Q6ZWM4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm8Q6ZWM4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm8Q6ZWM4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm8Q6ZWM4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms