Protein–RNA interactions for Protein: Q6ZQ93

Usp34, Ubiquitin carboxyl-terminal hydrolase 34, mousemouse

Predictions only

Length 3,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp34Q6ZQ93 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp34Q6ZQ93 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp34Q6ZQ93 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Usp34Q6ZQ93 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Gm4535-201ENSMUST00000182274 558 ntBASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Gm10355-201ENSMUST00000097146 517 ntBASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp34Q6ZQ93 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp34Q6ZQ93 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp34Q6ZQ93 Gm23547-201ENSMUST00000158210 271 ntBASIC19.15■□□□□ 0.66
Usp34Q6ZQ93 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp34Q6ZQ93 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.15■□□□□ 0.66
Usp34Q6ZQ93 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp34Q6ZQ93 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp34Q6ZQ93 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp34Q6ZQ93 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp34Q6ZQ93 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp34Q6ZQ93 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.15■□□□□ 0.66
Usp34Q6ZQ93 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.14■□□□□ 0.66
Usp34Q6ZQ93 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Usp34Q6ZQ93 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Usp34Q6ZQ93 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp34Q6ZQ93 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.14■□□□□ 0.66
Usp34Q6ZQ93 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Usp34Q6ZQ93 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp34Q6ZQ93 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp34Q6ZQ93 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp34Q6ZQ93 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.12■□□□□ 0.65
Usp34Q6ZQ93 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp34Q6ZQ93 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Usp34Q6ZQ93 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp34Q6ZQ93 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Usp34Q6ZQ93 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp34Q6ZQ93 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp34Q6ZQ93 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp34Q6ZQ93 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp34Q6ZQ93 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp34Q6ZQ93 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp34Q6ZQ93 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms