Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Casc1Q6TDU8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Casc1Q6TDU8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Casc1Q6TDU8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Casc1Q6TDU8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Casc1Q6TDU8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc1Q6TDU8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Gm37292-201ENSMUST00000192062 758 ntBASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.29■□□□□ 0.84
Casc1Q6TDU8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Gm6576-201ENSMUST00000169678 883 ntBASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.28■□□□□ 0.84
Casc1Q6TDU8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Mir1199-201ENSMUST00000117015 119 ntBASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc1Q6TDU8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.26■□□□□ 0.83
Casc1Q6TDU8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.26■□□□□ 0.83
Casc1Q6TDU8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.25■□□□□ 0.83
Casc1Q6TDU8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms