Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm11355-201ENSMUST00000121120 306 ntBASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Gm26039-201ENSMUST00000158152 144 ntBASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Gm10566-201ENSMUST00000086739 996 ntBASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Gm7461-201ENSMUST00000058918 827 ntBASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1l1Q6T3U4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1l1Q6T3U4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1l1Q6T3U4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1l1Q6T3U4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Npc1l1Q6T3U4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Npc1l1Q6T3U4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Npc1l1Q6T3U4 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.33■□□□□ 0.84
Npc1l1Q6T3U4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1l1Q6T3U4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1l1Q6T3U4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1l1Q6T3U4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1l1Q6T3U4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1l1Q6T3U4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.32■□□□□ 0.84
Npc1l1Q6T3U4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1l1Q6T3U4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1l1Q6T3U4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1l1Q6T3U4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1l1Q6T3U4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Gm18669-201ENSMUST00000216049 778 ntBASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms