Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.27■□□□□ 0.68
Scn10aQ6QIY3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn10aQ6QIY3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn10aQ6QIY3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn10aQ6QIY3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Gm4535-201ENSMUST00000182274 558 ntBASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Gm10355-201ENSMUST00000097146 517 ntBASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn10aQ6QIY3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Gm25745-201ENSMUST00000174945 133 ntBASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Gm7506-201ENSMUST00000207758 815 ntBASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn10aQ6QIY3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Gm15467-201ENSMUST00000120582 445 ntBASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn10aQ6QIY3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Gm13036-201ENSMUST00000117799 748 ntBASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn10aQ6QIY3 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms