Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Gm18115-201ENSMUST00000221209 621 ntBASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Wnt10b-204ENSMUST00000226655 1807 ntBASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx58Q6Q899 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.03■□□□□ 0.96
Ddx58Q6Q899 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Gm45328-201ENSMUST00000210942 917 ntBASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx58Q6Q899 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx58Q6Q899 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx58Q6Q899 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx58Q6Q899 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx58Q6Q899 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21■□□□□ 0.95
Ddx58Q6Q899 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx58Q6Q899 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ddx58Q6Q899 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms