Protein–RNA interactions for Protein: Q6PHS6

Snx13, Sorting nexin-13, mousemouse

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx13Q6PHS6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx13Q6PHS6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Snx13Q6PHS6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx13Q6PHS6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx13Q6PHS6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx13Q6PHS6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Gm11643-201ENSMUST00000119578 864 ntBASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.22■□□□□ 0.67
Snx13Q6PHS6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx13Q6PHS6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms