Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rprl3-201ENSMUST00000157400 290 ntBASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Gm44430-201ENSMUST00000203376 995 ntBASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Nup98Q6PFD9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Gm12895-201ENSMUST00000122214 226 ntBASIC20.02■□□□□ 0.79
Nup98Q6PFD9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.02■□□□□ 0.79
Nup98Q6PFD9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nup98Q6PFD9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nup98Q6PFD9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nup98Q6PFD9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nup98Q6PFD9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup98Q6PFD9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20■□□□□ 0.79
Nup98Q6PFD9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20■□□□□ 0.79
Nup98Q6PFD9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20■□□□□ 0.79
Nup98Q6PFD9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20■□□□□ 0.79
Nup98Q6PFD9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup98Q6PFD9 Mzt1-203ENSMUST00000227948 952 ntBASIC19.99■□□□□ 0.79
Nup98Q6PFD9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.99■□□□□ 0.79
Nup98Q6PFD9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 Gm12644-201ENSMUST00000119935 606 ntBASIC19.98■□□□□ 0.79
Nup98Q6PFD9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nup98Q6PFD9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms