Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Gm2651-201ENSMUST00000203560 838 ntBASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Grk6-206ENSMUST00000224995 2971 ntBASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Snrnp40Q6PE01 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Gm37935-201ENSMUST00000192012 982 ntBASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Snrnp40Q6PE01 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.92□□□□□ -0.02
Snrnp40Q6PE01 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.91□□□□□ -0.02
Snrnp40Q6PE01 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms