Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smchd1Q6P5D8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smchd1Q6P5D8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smchd1Q6P5D8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Gm14859-201ENSMUST00000117752 357 ntBASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.68■□□□□ 0.58
Smchd1Q6P5D8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Gm15794-201ENSMUST00000120182 631 ntBASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Gm8969-201ENSMUST00000199694 526 ntBASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Smchd1Q6P5D8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smchd1Q6P5D8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smchd1Q6P5D8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smchd1Q6P5D8 Gm18115-201ENSMUST00000221209 621 ntBASIC18.64■□□□□ 0.58
Smchd1Q6P5D8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.64■□□□□ 0.58
Smchd1Q6P5D8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Smchd1Q6P5D8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smchd1Q6P5D8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smchd1Q6P5D8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smchd1Q6P5D8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smchd1Q6P5D8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smchd1Q6P5D8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smchd1Q6P5D8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smchd1Q6P5D8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smchd1Q6P5D8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smchd1Q6P5D8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smchd1Q6P5D8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smchd1Q6P5D8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.64■□□□□ 0.57
Smchd1Q6P5D8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smchd1Q6P5D8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smchd1Q6P5D8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Smchd1Q6P5D8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Smchd1Q6P5D8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smchd1Q6P5D8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smchd1Q6P5D8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smchd1Q6P5D8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smchd1Q6P5D8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms