Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtl3Q6P1Y1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtl3Q6P1Y1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtl3Q6P1Y1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtl3Q6P1Y1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtl3Q6P1Y1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtl3Q6P1Y1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Gm18958-201ENSMUST00000174258 762 ntBASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Gm7367-201ENSMUST00000057611 492 ntBASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Rtl3Q6P1Y1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtl3Q6P1Y1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Gm45058-201ENSMUST00000205810 766 ntBASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Gm18032-201ENSMUST00000222541 538 ntBASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rtl3Q6P1Y1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Gm16061-201ENSMUST00000122167 857 ntBASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Gm23634-201ENSMUST00000175071 91 ntBASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Mir5130-201ENSMUST00000175160 84 ntBASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Gm7370-201ENSMUST00000219471 767 ntBASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtl3Q6P1Y1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtl3Q6P1Y1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rtl3Q6P1Y1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms