Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Hdac4Q6NZM9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.02■□□□□ 0.64
Hdac4Q6NZM9 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.02■□□□□ 0.64
Hdac4Q6NZM9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac4Q6NZM9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac4Q6NZM9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hdac4Q6NZM9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hdac4Q6NZM9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hdac4Q6NZM9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Gm18958-201ENSMUST00000174258 762 ntBASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.01■□□□□ 0.63
Hdac4Q6NZM9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 AC135963.1-201ENSMUST00000211640 717 ntBASIC19■□□□□ 0.63
Hdac4Q6NZM9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hdac4Q6NZM9 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hdac4Q6NZM9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac4Q6NZM9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Gm27463-201ENSMUST00000183569 57 ntBASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms