Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Krt42Q6IFX2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Krt42Q6IFX2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Krt42Q6IFX2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Krt42Q6IFX2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.51■□□□□ 0.39
Krt42Q6IFX2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt42Q6IFX2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt42Q6IFX2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt42Q6IFX2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Zfp783-201ENSMUST00000095946 670 ntBASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.48■□□□□ 0.39
Krt42Q6IFX2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Krt42Q6IFX2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms