Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.84■□□□□ 0.45
Scube3Q66PY1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scube3Q66PY1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scube3Q66PY1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Scube3Q66PY1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scube3Q66PY1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Scube3Q66PY1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scube3Q66PY1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scube3Q66PY1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Scube3Q66PY1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Scube3Q66PY1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.83■□□□□ 0.44
Scube3Q66PY1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scube3Q66PY1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scube3Q66PY1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scube3Q66PY1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scube3Q66PY1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scube3Q66PY1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scube3Q66PY1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.83■□□□□ 0.44
Scube3Q66PY1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scube3Q66PY1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scube3Q66PY1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.82■□□□□ 0.44
Scube3Q66PY1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scube3Q66PY1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.81■□□□□ 0.44
Scube3Q66PY1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.81■□□□□ 0.44
Scube3Q66PY1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Gm7213-201ENSMUST00000215977 950 ntBASIC17.81■□□□□ 0.44
Scube3Q66PY1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scube3Q66PY1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.8■□□□□ 0.44
Scube3Q66PY1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Gm18032-201ENSMUST00000222541 538 ntBASIC17.8■□□□□ 0.44
Scube3Q66PY1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Scube3Q66PY1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scube3Q66PY1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scube3Q66PY1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scube3Q66PY1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms