Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six1Q62231 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.45■□□□□ 0.38
Six1Q62231 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Six1Q62231 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six1Q62231 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.45■□□□□ 0.38
Six1Q62231 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.45■□□□□ 0.38
Six1Q62231 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Six1Q62231 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six1Q62231 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six1Q62231 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Six1Q62231 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six1Q62231 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six1Q62231 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six1Q62231 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.44■□□□□ 0.38
Six1Q62231 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.44■□□□□ 0.38
Six1Q62231 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.44■□□□□ 0.38
Six1Q62231 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.44■□□□□ 0.38
Six1Q62231 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Six1Q62231 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six1Q62231 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six1Q62231 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six1Q62231 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six1Q62231 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six1Q62231 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six1Q62231 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.43■□□□□ 0.38
Six1Q62231 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Six1Q62231 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.43■□□□□ 0.38
Six1Q62231 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.43■□□□□ 0.38
Six1Q62231 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six1Q62231 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six1Q62231 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six1Q62231 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six1Q62231 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Six1Q62231 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Six1Q62231 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Six1Q62231 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.42■□□□□ 0.38
Six1Q62231 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Six1Q62231 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.42■□□□□ 0.38
Six1Q62231 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.42■□□□□ 0.38
Six1Q62231 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.42■□□□□ 0.38
Six1Q62231 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Six1Q62231 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Six1Q62231 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Six1Q62231 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six1Q62231 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Six1Q62231 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.41■□□□□ 0.38
Six1Q62231 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.41■□□□□ 0.38
Six1Q62231 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Six1Q62231 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.41■□□□□ 0.38
Six1Q62231 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Six1Q62231 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six1Q62231 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Six1Q62231 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six1Q62231 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms