Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.03■□□□□ 0.8
Scn9aQ62205 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.03■□□□□ 0.8
Scn9aQ62205 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Gm13312-201ENSMUST00000119631 718 ntBASIC20.03■□□□□ 0.8
Scn9aQ62205 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.03■□□□□ 0.8
Scn9aQ62205 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn9aQ62205 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn9aQ62205 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scn9aQ62205 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn9aQ62205 Gm15467-201ENSMUST00000120582 445 ntBASIC20.02■□□□□ 0.8
Scn9aQ62205 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn9aQ62205 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.02■□□□□ 0.79
Scn9aQ62205 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scn9aQ62205 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.02■□□□□ 0.79
Scn9aQ62205 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn9aQ62205 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn9aQ62205 Gm23935-201ENSMUST00000102303 57 ntBASIC20.01■□□□□ 0.79
Scn9aQ62205 Gm24270-201ENSMUST00000102326 57 ntBASIC20.01■□□□□ 0.79
Scn9aQ62205 Gm24245-201ENSMUST00000157318 57 ntBASIC20.01■□□□□ 0.79
Scn9aQ62205 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.01■□□□□ 0.79
Scn9aQ62205 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn9aQ62205 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.01■□□□□ 0.79
Scn9aQ62205 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn9aQ62205 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn9aQ62205 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn9aQ62205 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.01■□□□□ 0.79
Scn9aQ62205 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.01■□□□□ 0.79
Scn9aQ62205 Gm6736-201ENSMUST00000166583 948 ntBASIC20.01■□□□□ 0.79
Scn9aQ62205 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.01■□□□□ 0.79
Scn9aQ62205 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Scn9aQ62205 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn9aQ62205 Gm7063-201ENSMUST00000186840 981 ntBASIC20.01■□□□□ 0.79
Scn9aQ62205 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.01■□□□□ 0.79
Scn9aQ62205 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn9aQ62205 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn9aQ62205 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn9aQ62205 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20■□□□□ 0.79
Scn9aQ62205 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn9aQ62205 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scn9aQ62205 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scn9aQ62205 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn9aQ62205 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn9aQ62205 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.99■□□□□ 0.79
Scn9aQ62205 Gm29707-201ENSMUST00000196325 491 ntBASIC19.99■□□□□ 0.79
Scn9aQ62205 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.99■□□□□ 0.79
Scn9aQ62205 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.99■□□□□ 0.79
Scn9aQ62205 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.99■□□□□ 0.79
Scn9aQ62205 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.99■□□□□ 0.79
Scn9aQ62205 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Scn9aQ62205 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn9aQ62205 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scn9aQ62205 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn9aQ62205 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Scn9aQ62205 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn9aQ62205 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Scn9aQ62205 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn9aQ62205 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn9aQ62205 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn9aQ62205 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn9aQ62205 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn9aQ62205 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn9aQ62205 Gm7230-201ENSMUST00000173026 815 ntBASIC19.97■□□□□ 0.79
Scn9aQ62205 Gm2756-201ENSMUST00000195851 400 ntBASIC19.97■□□□□ 0.79
Scn9aQ62205 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.97■□□□□ 0.79
Scn9aQ62205 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.97■□□□□ 0.79
Scn9aQ62205 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn9aQ62205 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn9aQ62205 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn9aQ62205 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn9aQ62205 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn9aQ62205 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Scn9aQ62205 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.97■□□□□ 0.79
Scn9aQ62205 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn9aQ62205 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.96■□□□□ 0.79
Scn9aQ62205 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Scn9aQ62205 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms