Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.44□□□□□ -0.26
Foxc2Q61850 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Gm11643-201ENSMUST00000119578 864 ntBASIC13.44□□□□□ -0.26
Foxc2Q61850 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Foxc2Q61850 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxc2Q61850 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Foxc2Q61850 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Foxc2Q61850 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.43□□□□□ -0.26
Foxc2Q61850 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.43□□□□□ -0.26
Foxc2Q61850 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.43□□□□□ -0.26
Foxc2Q61850 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Foxc2Q61850 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Foxc2Q61850 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Foxc2Q61850 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Foxc2Q61850 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxc2Q61850 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Foxc2Q61850 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.42□□□□□ -0.26
Foxc2Q61850 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Gm715-201ENSMUST00000117865 831 ntBASIC13.42□□□□□ -0.26
Foxc2Q61850 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Gm29791-202ENSMUST00000207888 369 ntBASIC13.42□□□□□ -0.26
Foxc2Q61850 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxc2Q61850 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Foxc2Q61850 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Foxc2Q61850 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.41□□□□□ -0.26
Foxc2Q61850 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.41□□□□□ -0.26
Foxc2Q61850 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.41□□□□□ -0.26
Foxc2Q61850 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.41□□□□□ -0.26
Foxc2Q61850 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxc2Q61850 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Foxc2Q61850 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms