Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ecm1Q61508 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ecm1Q61508 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ecm1Q61508 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ecm1Q61508 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ecm1Q61508 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.81■□□□□ 0.6
Ecm1Q61508 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ecm1Q61508 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.81■□□□□ 0.6
Ecm1Q61508 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ecm1Q61508 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ecm1Q61508 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ecm1Q61508 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ecm1Q61508 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ecm1Q61508 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ecm1Q61508 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ecm1Q61508 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ecm1Q61508 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ecm1Q61508 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ecm1Q61508 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.8■□□□□ 0.6
Ecm1Q61508 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ecm1Q61508 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ecm1Q61508 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Ecm1Q61508 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.8■□□□□ 0.6
Ecm1Q61508 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.8■□□□□ 0.6
Ecm1Q61508 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ecm1Q61508 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.8■□□□□ 0.6
Ecm1Q61508 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ecm1Q61508 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ecm1Q61508 Gm12644-201ENSMUST00000119935 606 ntBASIC18.79■□□□□ 0.6
Ecm1Q61508 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.79■□□□□ 0.6
Ecm1Q61508 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ecm1Q61508 Rprl3-201ENSMUST00000157400 290 ntBASIC18.79■□□□□ 0.6
Ecm1Q61508 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ecm1Q61508 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.79■□□□□ 0.6
Ecm1Q61508 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.79■□□□□ 0.6
Ecm1Q61508 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.79■□□□□ 0.6
Ecm1Q61508 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ecm1Q61508 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ecm1Q61508 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ecm1Q61508 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ecm1Q61508 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ecm1Q61508 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.78■□□□□ 0.6
Ecm1Q61508 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.78■□□□□ 0.6
Ecm1Q61508 Gm18733-201ENSMUST00000173950 856 ntBASIC18.78■□□□□ 0.6
Ecm1Q61508 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.78■□□□□ 0.6
Ecm1Q61508 Gm18195-201ENSMUST00000207604 706 ntBASIC18.78■□□□□ 0.6
Ecm1Q61508 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ecm1Q61508 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ecm1Q61508 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ecm1Q61508 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ecm1Q61508 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.77■□□□□ 0.6
Ecm1Q61508 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.77■□□□□ 0.6
Ecm1Q61508 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.77■□□□□ 0.6
Ecm1Q61508 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ecm1Q61508 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ecm1Q61508 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ecm1Q61508 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ecm1Q61508 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Ecm1Q61508 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.76■□□□□ 0.59
Ecm1Q61508 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ecm1Q61508 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.76■□□□□ 0.59
Ecm1Q61508 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ecm1Q61508 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms