Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Traf4Q61382 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Traf4Q61382 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Gm10231-201ENSMUST00000181584 441 ntBASIC15.09■□□□□ 0.01
Traf4Q61382 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Gm10175-202ENSMUST00000208752 441 ntBASIC15.09■□□□□ 0.01
Traf4Q61382 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.09■□□□□ 0.01
Traf4Q61382 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.09■□□□□ 0.01
Traf4Q61382 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.09■□□□□ 0.01
Traf4Q61382 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Traf4Q61382 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Traf4Q61382 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Traf4Q61382 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Traf4Q61382 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Traf4Q61382 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Traf4Q61382 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Traf4Q61382 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.08■□□□□ 0
Traf4Q61382 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.08■□□□□ 0
Traf4Q61382 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.08■□□□□ 0
Traf4Q61382 Gm3375-201ENSMUST00000203929 796 ntBASIC15.08■□□□□ 0
Traf4Q61382 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.08■□□□□ 0
Traf4Q61382 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.08■□□□□ 0
Traf4Q61382 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Traf4Q61382 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.08■□□□□ 0
Traf4Q61382 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.08■□□□□ 0
Traf4Q61382 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.08■□□□□ 0
Traf4Q61382 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Traf4Q61382 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Traf4Q61382 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
Traf4Q61382 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.07■□□□□ 0
Traf4Q61382 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Traf4Q61382 Mir2861-201ENSMUST00000175539 82 ntBASIC15.07■□□□□ 0
Traf4Q61382 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.07■□□□□ 0
Traf4Q61382 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.07■□□□□ 0
Traf4Q61382 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.07■□□□□ 0
Traf4Q61382 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.07■□□□□ 0
Traf4Q61382 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Traf4Q61382 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Traf4Q61382 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.06■□□□□ 0
Traf4Q61382 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Traf4Q61382 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.06■□□□□ 0
Traf4Q61382 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms