Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Ift88Q61371 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ift88Q61371 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ift88Q61371 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.83■□□□□ 0.61
Ift88Q61371 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ift88Q61371 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ift88Q61371 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ift88Q61371 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ift88Q61371 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ift88Q61371 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.83■□□□□ 0.61
Ift88Q61371 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ift88Q61371 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ift88Q61371 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.83■□□□□ 0.6
Ift88Q61371 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.83■□□□□ 0.6
Ift88Q61371 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.83■□□□□ 0.6
Ift88Q61371 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.83■□□□□ 0.6
Ift88Q61371 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ift88Q61371 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ift88Q61371 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ift88Q61371 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ift88Q61371 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ift88Q61371 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.81■□□□□ 0.6
Ift88Q61371 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ift88Q61371 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ift88Q61371 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ift88Q61371 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ift88Q61371 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.81■□□□□ 0.6
Ift88Q61371 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ift88Q61371 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ift88Q61371 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ift88Q61371 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ift88Q61371 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.81■□□□□ 0.6
Ift88Q61371 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Ift88Q61371 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ift88Q61371 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ift88Q61371 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ift88Q61371 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ift88Q61371 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Ift88Q61371 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.81■□□□□ 0.6
Ift88Q61371 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ift88Q61371 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ift88Q61371 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.8■□□□□ 0.6
Ift88Q61371 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
Ift88Q61371 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ift88Q61371 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ift88Q61371 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ift88Q61371 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.79■□□□□ 0.6
Ift88Q61371 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ift88Q61371 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Ift88Q61371 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ift88Q61371 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ift88Q61371 Gm27275-201ENSMUST00000184318 272 ntBASIC18.79■□□□□ 0.6
Ift88Q61371 Gm37292-201ENSMUST00000192062 758 ntBASIC18.79■□□□□ 0.6
Ift88Q61371 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ift88Q61371 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ift88Q61371 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ift88Q61371 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ift88Q61371 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ift88Q61371 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ift88Q61371 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ift88Q61371 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms