Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.68■□□□□ 0.26
Cacna1eQ61290 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.68■□□□□ 0.26
Cacna1eQ61290 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cacna1eQ61290 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.67■□□□□ 0.26
Cacna1eQ61290 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Gm27867-201ENSMUST00000184778 125 ntBASIC16.67■□□□□ 0.26
Cacna1eQ61290 Gm6443-201ENSMUST00000203599 874 ntBASIC16.67■□□□□ 0.26
Cacna1eQ61290 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cacna1eQ61290 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Gm27525-201ENSMUST00000184465 107 ntBASIC16.66■□□□□ 0.26
Cacna1eQ61290 Gm44430-201ENSMUST00000203376 995 ntBASIC16.66■□□□□ 0.26
Cacna1eQ61290 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.66■□□□□ 0.26
Cacna1eQ61290 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.66■□□□□ 0.26
Cacna1eQ61290 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.66■□□□□ 0.26
Cacna1eQ61290 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.66■□□□□ 0.26
Cacna1eQ61290 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.66■□□□□ 0.26
Cacna1eQ61290 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cacna1eQ61290 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cacna1eQ61290 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.65■□□□□ 0.26
Cacna1eQ61290 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cacna1eQ61290 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1eQ61290 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1eQ61290 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms